1College of Horticulture, Hebei Agricultural University/Hebei Provincial Collaborative Innovation Center for Green and High-efficiency Vegetable Industry/Provincial Key Laboratory of Vegetable Germplasm Innovation and Utilization, Baoding 071000;2Institute of Cereal and Oil Crops, Hebei Academy of Agricultural and Forestry Sciences/Hebei Laboratory of Crop Genetics and Breeding/Huang-Huai-Hai Key Laboratory of Biology and Genetic Improvement of Soybean, Ministry of Agriculture and Rural Affairs/National Soybean Improvement Center Shijiazhuang Sub-Center, Shijiazhuang 050030;3Hebei Seed Station, Shijiazhuang 050021;4Department of Horticulture, University of Arkansas, Fayetteville, Fayetteville 72701, USA
China Agriculture Research System (CARS-04-PS09); Hebei Agriculture Research System (HBCT2024060101); HAAFS Agriculture Science and Technology Innovation Project (2026KJCXZX-LYS-6); Yan Zhao Golden Platform Talent Gathering Plan of Hebei Province (B2025005024)
To characterize phenotypic variation in soluble sugar content of soybean sprouts and to elucidate its genetic basis, we evaluated 188 improved soybean varieties from the Huang-Huai-Hai region. Soluble sugar content in germinated sprouts was accurately quantified in 2023 and 2024, followed by a genome-wide association study (GWAS) using SNP markers. Substantial phenotypic variation was observed, with soluble sugar content ranging from 1.67 to 20.94 mg/g and a coefficient of variation of 33.33% and 26.73%, indicating considerable genetic diversity for this trait. GWAS detected five loci significantly associated with soluble sugar content [-log10(P)≥5.86] across two years, located on chromosomes 2, 10, 12, 14, and 18. Within these regions, 18 candidate genes were identified, with functional annotations enriched in carbohydrate metabolism pathways, including gluconeogenesis and trehalose synthesis, as well as cell wall biosynthesis. Expression analysis further showed that four candidate genes were differentially expressed between high- and low-sugar materials, supporting their potential roles in regulating soluble sugar accumulation. Overall, this study reveals the phenotypic diversity and genetic architecture of soluble sugar content in soybean sprouts from the Huang-Huai-Hai region. The identified loci and candidate genes provide valuable resources for functional marker development and marker-assisted breeding aimed at improving sprout quality.
