糜子种质资源淀粉含量与Waxy基因等位变异分析
作者:
作者单位:

1.甘肃省农业科学院生物技术研究所,兰州730070;2.甘肃省农业科学院作物研究所,兰州 730070;3.甘肃省农业科学院小麦研究所,兰州 730070

作者简介:

研究方向为作物种质资源评价与利用,E-mail: wanghm@gsagr.ac.cn

通讯作者:

董孔军,研究方向为杂粮作物育种,E-mail: broommillet@163.com

中图分类号:

基金项目:

甘肃省农业科学院农业科技自主创新专项(2021GAAS02);国家现代农业产业技术体系项目(CARS-06-14.5-A8);国家自然科学基金(31860378)


Analysis of Amylose Content and Allelic Variation of Waxy Gene in Broomcorn Millet Germplasm Resources
Author:
Affiliation:

1.Institute of Biotechnology, Gansu Academy of Agricultural Sciences, Lanzhou 730070;2.Crop Research Institute, Gansu Academy of Agricultural Sciences, Lanzhou 730070;3.Wheat Research Institute, Gansu Academy of Agricultural Sciences, Lanzhou 730070

Fund Project:

Foundation projects: The Agricultural Science and Technology Independent Innovation Project of Gansu Academy of Agricultural Sciences (2021GAAS02); The China Agriculture Research System Project (CARS-06-14.5-A8);The National Natural Science Foundation of China (31860378)

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    摘要:

    本研究测定了100份糜子种质资源的直链淀粉和支链淀粉含量,采用分子标记对胚乳直链淀粉合成调控基因Waxy进行基因分型,并选取不同直链淀粉含量代表种质资源进行基因测序和差异位点分析。结果表明,100份糜子种质资源直链淀粉含量变化幅度为0~22.78%,平均6.07%,直链淀粉含量低于3.7%的糯性材料占36%,完全糯性材料占24%;支链淀粉含量变化幅度为4.55%~56.73%,平均15.30%。分子标记M5/R11扩增产物能有效区分S0、S-15和S0S-15基因型;标记int5Lf/R3和M12/R12的PCR产物利用内切酶 ACC I和EcoN I剪切,可鉴别出LC、LY、LF基因型。100份糜子种质共发现9种基因型,其中S0/Lc数量最多,占33%,S-15/LF占25%,杂合型S0S-15/LF、S0S-15/LC、S0S-15 /LYLF各占2%。通过Waxy基因序列比对,在地方品种甘谷黑蝉背、黑糜子、庆阳饿死牛,育成品种晋黍9号、赤糜2号等种质资源中发现了大量新的SNPs位点,可用于基因功能和糜子育种材料创制研究。本研究结果为糜子分子育种工作及品质改良提供了理论依据。

    Abstract:

    The amylose and amylopectin contents of 100 broomcorn millet germplasm resources were measured, and they were genotyped by molecular markers targeting the Waxy gene, the key factor modulating amylose synthesis. Some representative resources showing different amylose content were sequenced by Sanger approach. The amylose content in the collection ranged from 0 to 22.78%, with an average of 6.07%. 36% of germplasm resources were detected with amylase content less than 3.7%, including 24% detected without amylase. The amylopectin content ranged from 4.55% to 56.73%, with an average of 15.30%. The functional marker M5/R11 was able to effectively distinguish S0, S-15 and S0S-15 genotypes, and PCR products of markers int5Lf/R3 and M12/R12 were digested by endonucleases Acc I and EcoN I, enabling the identification of LC, LY and LF alleles. Nine genotypes at the Waxy locus were found in the collection. The genotype S0/Lc accounted for 33%, and S-15/LF accounted for 25%. The genotypes remained heterozygous (S0S-15/LF, S0S-15/LC and S0S-15/LYLF), and each of them accounted for 2%. A large number of new SNPs were found among landraces such as Gangu Heichanbei, Black millet, Qingyang Esiniu, as well as the varieties Jinshu 9 and Chimi 2. These SNPs serve a potential in future gene function analysis and innovative breeding in broomcorn millet. Collectively, this study provided theoretical basis for molecular breeding and quality improvement in broomcorn millet.

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引用本文

王红梅,董孔军,何继红,等.糜子种质资源淀粉含量与Waxy基因等位变异分析[J].植物遗传资源学报,2024,25(7):1140-1152.

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  • 收稿日期:2023-12-26
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  • 在线发布日期: 2024-07-04
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