水稻分蘖角度基因TIG1功能性分子标记的开发和应用
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长江大学农学院

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国家自然科学基金项目(面上项目,重点项目,重大项目)


Development and application of functional molecular marker of rice tiller angle gene TIG1
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Yangtze university

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The National Natural Science Foundation of China (General Program, Key Program, Major Research Plan)

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    摘要:

    水稻分蘖角度是水稻株型建成的重要性状之一,对水稻产量有着重要的贡献。在野生稻导入栽培稻珍汕97的BC3F2群体第54号家系中分蘖角度存在分离,利用QTL-seq技术进行水稻分蘖角度的QTL定位,在8号染色体上检测到一个QTL位点。通过对区间内已知基因的序列比对提出TIG1 (TILLER INCLIDED GROWTH 1) 为候选基因。根据启动子-449bp处C?T的关键变异设计KASP功能性分子标记,并在定位群体和自然品种中进行了验证,证实利用该KASP标记可以准确的鉴定出TIG1位点的基因型。TIG1在粳稻中基本固定为强功能等位基因型(启动子-449bp处为C),但在籼稻中存在显著分离。该KASP标记的开发将使水稻株型的分子标记辅助选择育种更为简单有效。

    Abstract:

    The tiller angle is one of the most important traits in the plant architecture of rice, which has a significant impact on rice yield. We developed a BC3F2 populations with wild rice as the donor parent and cultivar zhenshan 97 as the recurrent parent. With QTL-seq we detected a QTL on chromosome 8 in line LHY54. After comparing the sequence of cloned gene in this region, TIG1 (TILLER INCLIDED GROWTH 1) was chosen as the candidate gene. In this study, a KASP molecular marker was designed based on the variation of the -449 bp C?T in the promoter of TIG1 gene. The marker was validated in the mapping population and cultivars, which is an efficient functional marker. TIG1 is fixed as strong functional TIG1 allele in Geng/japonica (C at - 449bp of promoter) but is largely divergent in Xian/indica. The development of this functional KASP marker would improve the efficiency of conventional rice plant architecture breeding via marker-assisted selection.

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历史
  • 收稿日期:2022-11-08
  • 最后修改日期:2022-12-26
  • 录用日期:2023-01-17
  • 在线发布日期: 2023-02-03
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