中间锦鸡儿 CiUPF0114 克隆与表达及豆科 UPF0114 基因家族成员分析
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内蒙古农业大学生命科学学院/内蒙古自治区植物逆境生理与分子生物学重点实验室/内蒙古自治区抗逆植物遗传资源利用与分子改良科技创新团队,呼和浩特 010018

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国家自然科学基金项目(31560199)


Cloning and Expression of CiUPF0114 in Caragana intermedia and Bioinformatics Analysis of UPF0114 Genes from Leguminosae
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College of Life Sciences, Inner Mongolia Agricultural University/Key Laboratory of Plant Stress and Physiology and Molecular Biology, Inner Mongolia Autonomous Region / Science and Technology Innovation Team for Remediation of Plant Genetic Resources and Molecular Improvement, Inner Mongolia Autonomous Region, Hohhot 010018

Fund Project:

The National Natural Science Foundation of China (General Program, Key Program, Major Research Plan)

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    摘要:

    本研究克隆了中间锦鸡儿一个CiUPF0114基因,该基因编码框长876 bp,编码291个氨基酸的蛋白质,预测等电点9.83,分子量32.13 kD。在干旱、脱水和冷处理后,CiUPF0114基因转录水平的表达量均明显上调。通过全基因组筛选,获得了29个来自于8种豆科植物以及模式植物拟南芥和水稻中的UPF0114基因家族成员,并对其进行了系统进化分析、基因结构和保守基序分析。系统进化分析将UPF0114基因分成A和B两个亚家族,A亚家族又分成A1和A2两个组,中间锦鸡儿CiUPF0114属于B亚家族成员。该研究为进一步验证CiUPF0114基因的功能奠定了基础。

    Abstract:

    This study reported the isolation of CiUPF0114 gene from Caragana intermedia, which contained an 876 bp open reading frame, encoding for a protein with 291 amino acids. The predicted isoelectric point and molecular weight of CiUPF0114 were 9.83 and 32.13 kD, respectively. The expression level of CiUPF0114 gene was significantly up-regulated under drought, dehydration or cold treatments. Furthermore by genome-wide screening, a total of 29 UPF0114 gene family members were identified from eight legumes, Arabidopsis and rice. The UPF0114 genes from were divided into subfamily A and subfamily B according to phylogenetic analysis. The A subfamily was further divided into two groups, A1 and A2. CiUPF0114, a gene from Caragana intermedia, belongs to the B subfamily. These results might lay the foundation for further study on the functions of CiUPF0114.

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杨杞,牛肖翠,王瑞刚,等.中间锦鸡儿 CiUPF0114 克隆与表达及豆科 UPF0114 基因家族成员分析[J].植物遗传资源学报,2019,20(3):760-768.

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  • 收稿日期:2018-08-29
  • 最后修改日期:2018-12-03
  • 录用日期:2018-12-04
  • 在线发布日期: 2019-05-13
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