花生红色种皮花青素生物合成转录-代谢组学联合分析
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1.河北农业大学华北作物种质资源教育部重点实验室/河北种质资源实验室;2.濮阳市农林科学院;3.承德农林科学院

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河北省高等学校科学技术研究项目(ZD2022069,);河北省青年拔尖人才资助项目(0602015);河北省重点研发计划项目现代种业科技专项(19226363D);曲阳庄子河太行山农业创新驿站建设项目(903-311718001).


Transcriptomics-Metabolomics Combined Analyses Highlight the Anthocyanin Biosynthesis Mechanism of Red Testa in Peanut(Arachis hypogaea L.)
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Affiliation:

1.North China Key Laboratory for Crop Germplasm Resources of Education Ministry/Hebei Germplasm Resources Laboratory/Hebei Agricultural University;2.Puyang Academy of Agricultural and Forestry Sciences;3.Chengde Academy of Agriculture and Forestry Sciences

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Key Project of Science and Technology Research in Colleges and Universities of the Department of Education in Hebei Province(ZD2022069),Project of youth top talent funding in Hebei Province(0602015), Key Project of Science and Technology Research of Modern Seed Industry of the Department of S&T in Hebei Province(19226363D),Project of the construction of Zhuangzi River Taihang Mountain agricultural innovation station in Quyang(903-311718001).

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    摘要:

    本研究以红珍珠(H)和白珍珠(B)两个花生品种为研究材料,进行转录组学-代谢组学联合分析。在DAF 30和DAF 45时期,H和B种皮色差值(L值、a值、b值)和花青素含量均表现品种间显著差异(p<0.05)。FPKM 层次聚类分析结果表明,B1 vs B2、H1 vs H2、B1 vs H1和B2 vs H2共有差异表达基因(DEGs)402个,独有基因分别为173、1017、1847和1843个。GO 分析注释结果表明, 8条 GO Terms 与花青素合成密切相关,其中 GO:0055114 和 GO:0016207 两个条目分别富集到8个和7个DEGs。KEGG 富集分析结果表明,6条代谢途径与花青素生物合成显著相关,其中类黄酮生物合成途径富集到的DEGs分别为6,、17、15和23个,富集因子分别为2.17、2.10、1.25和2.62。代谢组学结果表明,差异代谢物(DAMs)定位到了矢车菊素、原花青素、矮牵牛素、翠雀花素、锦葵素、牡丹素及其衍生物。转录组-代谢组联合分析结果表明,类黄酮生物合成途径(ko00941)是种皮颜色形成的关键途径,翠雀花素和矢车菊素为关键DAMs。对11个被检DEGs的qRT-PCR表达趋势与转录组测序结果一致。本研究结果对揭示花生种皮花青素生物合成调控机制具有一定的参考意义。

    Abstract:

    In this study, two peanut varieties, red pearl (H) and white pearl (B, the control), were used as research samples for transcriptomic-metabolomics combined analysis. For the detection of testa color ( L- , a- and b-value) and anthocyanin content in DAF 30 and DAF 45,sample H and B showed significant differences between varieties (P<0.05). FPKM hierarchical cluster analysis showed that there were 402 identical differential expressed genes (DEGs) in 4 comparison groups, and there were 173, 1 017, 1 847 and 1 843 unique genes, respectively.GO analysis annotation results showed there were 8 GO Terms significantly related to anthocyanin synthesis. Among them, GO:0055114 and GO:0016207 had enriched with 8 and 7 DEGs respectively. The results of KEGG enrichment analysis showed that 6 metabolic pathways were significantly related to anthocyanin biosynthesis, among which flavonoids biosynthesis pathway enriched 6, 17, 15 and 23 DEGs, and the enrichment factors were 2.17, 2.10, 1.25 and 2.62, respectively. Metabolomics results showed that Cyanidin, Procyanidin, Petunidin, Delphinidin, Malvidin, peony (Peonidin) and their derivatives were located in differential accumulated metabolites (DAMs). The transcriptomics-metabolomics combined analysis showed that flavonoid biosynthesis (ko00941) is the key synthetic pathway , and delphin and centaurea are the key DAMs of testa color formation. were verified by qRT-PCR. The expression trend of 11 detected DEGs was consistent with the results of transcriptome sequencing. The results of this study have a certain reference significance for revealing the regulatory mechanism of anthocyanin synthesis in peanut testa.

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  • 收稿日期:2023-12-15
  • 最后修改日期:2024-05-27
  • 录用日期:2024-07-15
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