向日葵RIL群体产量相关性状QTL定位及候选基因筛选
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内蒙古农业大学农学院

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内蒙古农业大学动植物品种培育专项(YZGC2017004) ;国家自然科学基金(31760396)


QTL Mapping and Candidate Gene Analysis of Yield-related Traits in Sunflower RIL Population
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Agricultural College, Inner Mongolia Agricultural University

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Special program for animal and plant variety cultivation of Inner Mongolia Agricultural University (YZGC2017004),National Natural Science Foundation of China (31760396)

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    摘要:

    为深入分析向日葵产量相关性状的分子遗传机制,挖掘有效的分子标记和基因,本研究在前期构建的SNP分子标记高密度连锁图谱基础上,结合2019年和2020年两个环境下的表型数据,利用RQTL软件对以K55×K58组合衍生的150个向日葵重组自交系(RIL)群体的产量相关性状进行QTL定位和候选基因筛选。结果表明,两个环境下共检测到株高、茎粗、叶片数、单盘粒数、单盘粒重、单盘空粒数、百粒重、结实率8个性状的9个QTL(LOD≧2),其中,茎粗和百粒重在两年环境下均检测到QTL位点,分别为Qsd17、Qsd9、Qhgw8和Qhgw5,检测到1个同时控制单盘粒数和茎粗的一因多效位点(Qsd17、Qngp17),这些QTL位点分布在4、5、7、8、9、13、14、16和17号染色体上,表型变异贡献率0.265%~13.075%,其中17号染色体上分布的QTL位点最多(2个),且有2个表型贡献率超过10%的主效位点(Qngp17、Qhgw8)。在稳定或主效(PVE>10%)的QTL位点内注释到14个候选基因,这些基因参与碳水化合物过程与细胞壁/膜/包膜生物发生过程,具有NADH脱氢酶、E3泛素蛋白连接酶、SAUR家族蛋白、MADS-box转录因子、MYB家族转录因子等功能,此结果可为向日葵高产育种提供理论基础。

    Abstract:

    In order to understand the molecular genetic mechanism of yield-related traits and identify markers/genes in sunflower, QTL mapping and candidate gene identification of yield-related traits were performed using 150 individuals derived from recombinant inbred line (RIL) population of K55×K58 combination. The phenotype data at two environmental conditions in 2019 and 2020 were producted, and the high-density linkage map of SNP molecular markers were deployed. The results showed that nine QTL (LOD≧2) for 8 traits including plant height, stem thickness, number of leaves, number of grains particles, grain weight, number of empty grains particles, 100-seed weight, and seed setting rate were detected, in which QTL loci at stem diameter (Qsd17, Qsd9) and 100-grain weight (Qhgw8 and Qhgw5) were detected at two environmental conditions. A multi-genic effect site (Qsd17, Qngp17) controlling the number of grains and stem thickness was detected. These QTL loci were found on chromosomes 4, 5, 7, 9, 13, 14, 16 and 17, and the contribution rate of phenotypic variation was 0.265%-13.075%. There were two main effect loci (Qngp17 and Qhgw8) with phenotypic contribution over 10% on chromosome 17. Fourteen candidate genes were annotated in QTL loci with stable or main effect (PVE>10%), These genes are involved in carbohydrate processes and cell wall/membrane/envelope biogenesis, and annotated such as NADH dehydrogenase, E3 ubiquitin protein ligase, SAUR family proteins, MADS-box transcription factors, MYB family transcription factors. Collectively, these results might provide theoretical basis for sunflower high-yield breeding.

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苏飞燕,侯建华,伊六喜,等.向日葵RIL群体产量相关性状QTL定位及候选基因筛选[J].植物遗传资源学报,2022,23(5):1474-1486.

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  • 收稿日期:2022-02-26
  • 最后修改日期:2022-03-21
  • 录用日期:2022-04-01
  • 在线发布日期: 2022-09-09
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